Carnation DB

Dca61287.1

Annotation

6-exons
f-1
sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold950)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61287.1	119	1088	1090	59.35	970	60	0
Target_name	Start	End	Length	Cov(%)
sp\|Q6L3N8_SOLDE	252	1332	1333	81.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61287.1	988	1085	1090	4.22	98	47	4e-18
Target_name	Start	End	Length	Cov(%)
Os08t0125300-01	1328	1425	1428	6.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold950	Augustus	mRNA	76288	80740	.	+	.	ID=Dca61287.1;Parent=Dca61287
scaffold950	Augustus	exon	76288	76408	.	+	.	ID=Dca61287.1.exon1;Parent=Dca61287.1
scaffold950	Augustus	exon	76491	76612	.	+	.	ID=Dca61287.1.exon2;Parent=Dca61287.1
scaffold950	Augustus	exon	76750	76786	.	+	.	ID=Dca61287.1.exon3;Parent=Dca61287.1
scaffold950	Augustus	exon	77394	79736	.	+	.	ID=Dca61287.1.exon4;Parent=Dca61287.1
scaffold950	Augustus	exon	79899	80210	.	+	.	ID=Dca61287.1.exon5;Parent=Dca61287.1
scaffold950	Augustus	exon	80403	80740	.	+	.	ID=Dca61287.1.exon6;Parent=Dca61287.1