Dca6141.1
Annotation
- 3-exons
- f-1
- sp|B9IGJ7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_577082#unknown#0F0P0C
- AT4G38495.1 | Symbols: | CONTAINS InterPro DOMAIN/s: YL1 nuclear, C-terminal (InterPro:IPR013272); Has 279 Blast hits to 279 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 94; Fungi - 133; Plants - 35; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | chr4:18007466-18008025 REVERSE LENGTH=124
- Repeat List (scaffold124)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6141.1 |
1 |
123 |
123 |
77.23 |
123 |
78 |
9e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IGJ7_POPTR |
1 |
123 |
123 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6141.1 |
1 |
123 |
123 |
70.73 |
123 |
71 |
6e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0274400-01 |
1 |
124 |
125 |
99.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold124 |
Augus-PASA |
mRNA |
87290 |
89262 |
. |
- |
. |
ID=Dca6141.1;Parent=Dca6141 |
| scaffold124 |
Augus-PASA |
exon |
87290 |
87421 |
. |
- |
. |
ID=Dca6141.1.exon1;Parent=Dca6141.1 |
| scaffold124 |
Augus-PASA |
exon |
88436 |
88503 |
. |
- |
. |
ID=Dca6141.1.exon2;Parent=Dca6141.1 |
| scaffold124 |
Augus-PASA |
exon |
89091 |
89262 |
. |
- |
. |
ID=Dca6141.1.exon3;Parent=Dca6141.1 |
