Dca6146.1
Annotation
- 4-exons
- f-1
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold124)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6146.1 |
57 |
516 |
1583 |
10.1 |
460 |
31 |
3e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FZN9_ARATH |
28 |
543 |
1864 |
27.68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6146.1 |
709 |
1572 |
1583 |
17.37 |
864 |
31 |
4e-93
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
580 |
1408 |
1539 |
53.86 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold124 |
Augustus |
mRNA |
117993 |
123741 |
. |
+ |
. |
ID=Dca6146.1;Parent=Dca6146 |
| scaffold124 |
Augustus |
exon |
117993 |
118979 |
. |
+ |
. |
ID=Dca6146.1.exon1;Parent=Dca6146.1 |
| scaffold124 |
Augustus |
exon |
119112 |
119879 |
. |
+ |
. |
ID=Dca6146.1.exon2;Parent=Dca6146.1 |
| scaffold124 |
Augustus |
exon |
120661 |
123309 |
. |
+ |
. |
ID=Dca6146.1.exon3;Parent=Dca6146.1 |
| scaffold124 |
Augustus |
exon |
123394 |
123741 |
. |
+ |
. |
ID=Dca6146.1.exon4;Parent=Dca6146.1 |
