Carnation DB

Dca61471.1

Annotation

6-exons
f-1
sp|B9HWA4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_880253#GO:0015297;GO:0015238#2F0P0C
AT1G15160.1 | Symbols: | MATE efflux family protein | chr1:5215475-5217545 FORWARD LENGTH=487
Repeat List (scaffold956)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61471.1	8	399	413	68.03	392	72	2e-169
Target_name	Start	End	Length	Cov(%)
sp\|B9HWA4_POPTR	88	479	482	81.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61471.1	8	407	413	56.65	400	59	2e-144
Target_name	Start	End	Length	Cov(%)
AT1G15160.1	87	484	487	81.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold956	Augustus	mRNA	86844	88789	.	+	.	ID=Dca61471.1;Parent=Dca61471
scaffold956	Augustus	exon	86844	87409	.	+	.	ID=Dca61471.1.exon1;Parent=Dca61471.1
scaffold956	Augustus	exon	87503	87589	.	+	.	ID=Dca61471.1.exon2;Parent=Dca61471.1
scaffold956	Augustus	exon	87680	87736	.	+	.	ID=Dca61471.1.exon3;Parent=Dca61471.1
scaffold956	Augustus	exon	88046	88284	.	+	.	ID=Dca61471.1.exon4;Parent=Dca61471.1
scaffold956	Augustus	exon	88372	88577	.	+	.	ID=Dca61471.1.exon5;Parent=Dca61471.1
scaffold956	Augustus	exon	88703	88789	.	+	.	ID=Dca61471.1.exon6;Parent=Dca61471.1