Dca61782.1
Annotation
- 3-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold968)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca61782.1 |
1 |
373 |
373 |
62.73 |
373 |
55 |
4e-125
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1038 |
1469 |
1553 |
27.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca61782.1 |
48 |
353 |
373 |
29.22 |
306 |
34 |
4e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1086 |
1410 |
1539 |
21.11 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold968 |
Augustus |
mRNA |
11801 |
13095 |
. |
- |
. |
ID=Dca61782.1;Parent=Dca61782 |
| scaffold968 |
Augustus |
exon |
11801 |
12179 |
. |
- |
. |
ID=Dca61782.1.exon1;Parent=Dca61782.1 |
| scaffold968 |
Augustus |
exon |
12242 |
12759 |
. |
- |
. |
ID=Dca61782.1.exon2;Parent=Dca61782.1 |
| scaffold968 |
Augustus |
exon |
12871 |
13095 |
. |
- |
. |
ID=Dca61782.1.exon3;Parent=Dca61782.1 |
