Carnation DB

Dca61856.1

Annotation

6-exons
f-1
sp|B9N4E3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_744175#unknown#0F0P0C
AT5G15630.1 | Symbols: COBL4, IRX6 | COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family | chr5:5084842-5086545 FORWARD LENGTH=431
Repeat List (scaffold97)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61856.1	7	418	441	78	412	84	0
Target_name	Start	End	Length	Cov(%)
sp\|B9N4E3_POPTR	21	431	453	90.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61856.1	27	436	441	75.28	410	81	0
Target_name	Start	End	Length	Cov(%)
AT5G15630.1	20	427	431	94.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold97	Augus-PASA	mRNA	134786	136562	.	+	.	ID=Dca61856.1;Parent=Dca61856
scaffold97	Augus-PASA	exon	134786	134861	.	+	.	ID=Dca61856.1.exon1;Parent=Dca61856.1
scaffold97	Augus-PASA	exon	134953	135032	.	+	.	ID=Dca61856.1.exon2;Parent=Dca61856.1
scaffold97	Augus-PASA	exon	135120	135576	.	+	.	ID=Dca61856.1.exon3;Parent=Dca61856.1
scaffold97	Augus-PASA	exon	135667	135814	.	+	.	ID=Dca61856.1.exon4;Parent=Dca61856.1
scaffold97	Augus-PASA	exon	135914	136191	.	+	.	ID=Dca61856.1.exon5;Parent=Dca61856.1
scaffold97	Augus-PASA	exon	136276	136562	.	+	.	ID=Dca61856.1.exon6;Parent=Dca61856.1