Carnation DB

Dca62001.1

Annotation

11-exons
f-1
sp|B9HIC8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1084806#unknown#0F0P0C
sp|G7JXX6_MEDTR#Leucine-rich repeat receptor protein kinase EXS#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g043800#GO:0016301;GO:0004872#2F0P0C
Repeat List (scaffold976)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62001.1	4	328	328	84.45	325	86	2e-164
Target_name	Start	End	Length	Cov(%)
sp\|B9HIC8_POPTR	6	327	327	98.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62001.1	6	328	328	82.92	323	81	1e-158
Target_name	Start	End	Length	Cov(%)
AT5G61240.2	5	339	339	98.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold976	Augus-PASA	mRNA	63865	71378	.	+	.	ID=Dca62001.1;Parent=Dca62001
scaffold976	Augus-PASA	exon	63865	63955	.	+	.	ID=Dca62001.1.exon1;Parent=Dca62001.1
scaffold976	Augus-PASA	exon	65028	65175	.	+	.	ID=Dca62001.1.exon2;Parent=Dca62001.1
scaffold976	Augus-PASA	exon	65365	65436	.	+	.	ID=Dca62001.1.exon3;Parent=Dca62001.1
scaffold976	Augus-PASA	exon	65522	65593	.	+	.	ID=Dca62001.1.exon4;Parent=Dca62001.1
scaffold976	Augus-PASA	exon	67543	67614	.	+	.	ID=Dca62001.1.exon5;Parent=Dca62001.1
scaffold976	Augus-PASA	exon	67705	67848	.	+	.	ID=Dca62001.1.exon6;Parent=Dca62001.1
scaffold976	Augus-PASA	exon	67948	68028	.	+	.	ID=Dca62001.1.exon7;Parent=Dca62001.1
scaffold976	Augus-PASA	exon	68124	68195	.	+	.	ID=Dca62001.1.exon8;Parent=Dca62001.1
scaffold976	Augus-PASA	exon	68357	68428	.	+	.	ID=Dca62001.1.exon9;Parent=Dca62001.1
scaffold976	Augus-PASA	exon	71118	71189	.	+	.	ID=Dca62001.1.exon10;Parent=Dca62001.1
scaffold976	Augus-PASA	exon	71288	71378	.	+	.	ID=Dca62001.1.exon11;Parent=Dca62001.1