Carnation DB

Dca62020.1

Annotation

8-exons
f-1
sp|F6GVR1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0083g00220#GO:0003676;GO:0008270#2F0P0C
sp|B9SJ03_RICCO#Nucleic acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0597470#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold977)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62020.1	85	477	485	41.03	393	50	3e-94
Target_name	Start	End	Length	Cov(%)
sp\|F6GVR1_VITVI	164	532	629	58.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62020.1	63	373	485	30.51	311	47	1e-71
Target_name	Start	End	Length	Cov(%)
AT1G67210.1	42	359	405	78.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold977	Augustus	mRNA	23463	26869	.	-	.	ID=Dca62020.1;Parent=Dca62020
scaffold977	Augustus	exon	23463	23980	.	-	.	ID=Dca62020.1.exon1;Parent=Dca62020.1
scaffold977	Augustus	exon	24129	24192	.	-	.	ID=Dca62020.1.exon2;Parent=Dca62020.1
scaffold977	Augustus	exon	24398	24647	.	-	.	ID=Dca62020.1.exon3;Parent=Dca62020.1
scaffold977	Augus-PASA	exon	25061	25194	.	-	.	ID=Dca62020.1.exon4;Parent=Dca62020.1
scaffold977	Augus-PASA	exon	25830	25919	.	-	.	ID=Dca62020.1.exon5;Parent=Dca62020.1
scaffold977	Augus-PASA	exon	26060	26135	.	-	.	ID=Dca62020.1.exon6;Parent=Dca62020.1
scaffold977	Augus-PASA	exon	26241	26313	.	-	.	ID=Dca62020.1.exon7;Parent=Dca62020.1
scaffold977	Augustus	exon	26617	26869	.	-	.	ID=Dca62020.1.exon8;Parent=Dca62020.1