Dca62128.1
Annotation
- 4-exons
- f-1
- sp|D7KLA7_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_474506#GO:0003676;GO:0000166;GO:0003755;GO:0008270;GO:0006457#4F1P0C
- AT1G53720.1 | Symbols: ATCYP59, CYP59 | cyclophilin 59 | chr1:20057012-20059508 FORWARD LENGTH=506
- Repeat List (scaffold980)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62128.1 |
9 |
86 |
121 |
43.8 |
78 |
67 |
9e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7KLA7_ARALL |
288 |
365 |
508 |
15.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62128.1 |
9 |
86 |
121 |
42.97 |
78 |
65 |
2e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G53720.1 |
288 |
364 |
506 |
15.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold980 |
Augustus |
mRNA |
4838 |
6980 |
. |
+ |
. |
ID=Dca62128.1;Parent=Dca62128 |
| scaffold980 |
Augustus |
exon |
4838 |
4868 |
. |
+ |
. |
ID=Dca62128.1.exon1;Parent=Dca62128.1 |
| scaffold980 |
Augustus |
exon |
6072 |
6112 |
. |
+ |
. |
ID=Dca62128.1.exon2;Parent=Dca62128.1 |
| scaffold980 |
Augustus |
exon |
6466 |
6562 |
. |
+ |
. |
ID=Dca62128.1.exon3;Parent=Dca62128.1 |
| scaffold980 |
Augustus |
exon |
6784 |
6980 |
. |
+ |
. |
ID=Dca62128.1.exon4;Parent=Dca62128.1 |
