Dca62309.1
Annotation
- 3-exons
- f-20
- sp|A9PE37_POPTR#Regulatory subunit of cyclin-dependent kinase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=CKS1#GO:0016538;GO:0016301#2F0P0C
- Repeat List (scaffold9876)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62309.1 |
7 |
92 |
92 |
88.04 |
86 |
95 |
2e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PE37_POPTR |
1 |
84 |
84 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62309.1 |
7 |
86 |
92 |
79.34 |
80 |
92 |
6e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G27970.1 |
1 |
80 |
83 |
96.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9876 |
Augustus |
mRNA |
1139 |
2196 |
. |
+ |
. |
ID=Dca62309.1;Parent=Dca62309 |
| scaffold9876 |
Augustus |
exon |
1139 |
1210 |
. |
+ |
. |
ID=Dca62309.1.exon1;Parent=Dca62309.1 |
| scaffold9876 |
Augustus |
exon |
1333 |
1393 |
. |
+ |
. |
ID=Dca62309.1.exon2;Parent=Dca62309.1 |
| scaffold9876 |
Augustus |
exon |
2050 |
2196 |
. |
+ |
. |
ID=Dca62309.1.exon3;Parent=Dca62309.1 |
