Carnation DB

Dca62336.1

Annotation

6-exons
f-1
sp|B9RAG9_RICCO#AMP-activated protein kinase, gamma regulatory subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1506390#GO:0016301#1F0P0C
Repeat List (scaffold989)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62336.1	3	437	437	66.81	435	67	8e-165
Target_name	Start	End	Length	Cov(%)
sp\|B9RAG9_RICCO	26	459	459	94.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62336.1	29	437	437	61.32	409	65	3e-150
Target_name	Start	End	Length	Cov(%)
AT3G48530.1	23	424	424	94.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold989	Augus-PASA	mRNA	19007	22302	.	+	.	ID=Dca62336.1;Parent=Dca62336
scaffold989	Augus-PASA	exon	19007	19229	.	+	.	ID=Dca62336.1.exon1;Parent=Dca62336.1
scaffold989	Augus-PASA	exon	19470	19639	.	+	.	ID=Dca62336.1.exon2;Parent=Dca62336.1
scaffold989	Augus-PASA	exon	20716	20904	.	+	.	ID=Dca62336.1.exon3;Parent=Dca62336.1
scaffold989	Augus-PASA	exon	20987	21256	.	+	.	ID=Dca62336.1.exon4;Parent=Dca62336.1
scaffold989	Augus-PASA	exon	21677	21837	.	+	.	ID=Dca62336.1.exon5;Parent=Dca62336.1
scaffold989	Augus-PASA	exon	22002	22302	.	+	.	ID=Dca62336.1.exon6;Parent=Dca62336.1