Carnation DB

Dca62380.1

Annotation

6-exons
f-1
sp|Q6L3T5_SOLDE#Putative Sas10/Utp3 family protein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_40t00002#GO:0005634;GO:0016458#0F1P1C
Repeat List (scaffold99)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62380.1	28	66	182	11.53	39	54	1e-06
Target_name	Start	End	Length	Cov(%)
sp\|Q6L3T5_SOLDE	27	65	746	5.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62380.1	74	182	182	30.76	109	50	3e-20
Target_name	Start	End	Length	Cov(%)
Os01t0104800-01	534	645	646	17.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold99	Augus-PASA	mRNA	120207	121500	.	-	.	ID=Dca62380.1;Parent=Dca62380
scaffold99	Augus-PASA	exon	120207	120338	.	-	.	ID=Dca62380.1.exon1;Parent=Dca62380.1
scaffold99	Augus-PASA	exon	120456	120518	.	-	.	ID=Dca62380.1.exon2;Parent=Dca62380.1
scaffold99	Augus-PASA	exon	120604	120667	.	-	.	ID=Dca62380.1.exon3;Parent=Dca62380.1
scaffold99	Augus-PASA	exon	120993	121075	.	-	.	ID=Dca62380.1.exon4;Parent=Dca62380.1
scaffold99	Augus-PASA	exon	121182	121273	.	-	.	ID=Dca62380.1.exon5;Parent=Dca62380.1
scaffold99	Augustus	exon	121386	121500	.	-	.	ID=Dca62380.1.exon6;Parent=Dca62380.1