Carnation DB

Dca62384.1

Annotation

6-exons
f-1
sp|F6I0K5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g04760#unknown#0F0P0C
Os02t0705500-02 Helix-loop-helix DNA-binding domain containing protein.
Repeat List (scaffold99)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62384.1	9	462	490	45.1	454	48	3e-98
Target_name	Start	End	Length	Cov(%)
sp\|F6I0K5_VITVI	7	442	453	96.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62384.1	185	444	490	23.87	260	43	2e-47
Target_name	Start	End	Length	Cov(%)
Os02t0705500-02	82	339	362	71.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold99	Augustus	mRNA	137125	139133	.	-	.	ID=Dca62384.1;Parent=Dca62384
scaffold99	Augustus	exon	137125	137313	.	-	.	ID=Dca62384.1.exon1;Parent=Dca62384.1
scaffold99	Augustus	exon	137397	137606	.	-	.	ID=Dca62384.1.exon2;Parent=Dca62384.1
scaffold99	Augustus	exon	137696	137767	.	-	.	ID=Dca62384.1.exon3;Parent=Dca62384.1
scaffold99	Augustus	exon	137866	138000	.	-	.	ID=Dca62384.1.exon4;Parent=Dca62384.1
scaffold99	Augustus	exon	138159	138431	.	-	.	ID=Dca62384.1.exon5;Parent=Dca62384.1
scaffold99	Augus-PASA	exon	138540	139133	.	-	.	ID=Dca62384.1.exon6;Parent=Dca62384.1