Carnation DB

Dca62409.1

Annotation

13-exons
f-1
sp|B9HWL3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_769685#unknown#0F0P0C
AT1G25540.1 | Symbols: PFT1 | phytochrome and flowering time regulatory protein (PFT1) | chr1:8969392-8974446 REVERSE LENGTH=836
Repeat List (scaffold990)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62409.1	15	638	820	47.31	624	60	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HWL3_POPTR	42	685	796	80.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62409.1	13	639	820	43.65	627	56	5e-176
Target_name	Start	End	Length	Cov(%)
AT1G25540.1	51	679	836	75.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold990	Augustus	mRNA	11666	18542	.	+	.	ID=Dca62409.1;Parent=Dca62409
scaffold990	Augustus	exon	11666	11750	.	+	.	ID=Dca62409.1.exon1;Parent=Dca62409.1
scaffold990	Augustus	exon	12204	12334	.	+	.	ID=Dca62409.1.exon2;Parent=Dca62409.1
scaffold990	Augustus	exon	13719	13928	.	+	.	ID=Dca62409.1.exon3;Parent=Dca62409.1
scaffold990	Augustus	exon	14035	14100	.	+	.	ID=Dca62409.1.exon4;Parent=Dca62409.1
scaffold990	Augustus	exon	14544	14724	.	+	.	ID=Dca62409.1.exon5;Parent=Dca62409.1
scaffold990	Augustus	exon	15277	15344	.	+	.	ID=Dca62409.1.exon6;Parent=Dca62409.1
scaffold990	Augustus	exon	15433	16254	.	+	.	ID=Dca62409.1.exon7;Parent=Dca62409.1
scaffold990	Augustus	exon	16508	16561	.	+	.	ID=Dca62409.1.exon8;Parent=Dca62409.1
scaffold990	Augustus	exon	16650	16678	.	+	.	ID=Dca62409.1.exon9;Parent=Dca62409.1
scaffold990	Augustus	exon	17044	17112	.	+	.	ID=Dca62409.1.exon10;Parent=Dca62409.1
scaffold990	Augustus	exon	17287	17371	.	+	.	ID=Dca62409.1.exon11;Parent=Dca62409.1
scaffold990	Augustus	exon	17717	17803	.	+	.	ID=Dca62409.1.exon12;Parent=Dca62409.1
scaffold990	Augustus	exon	17967	18542	.	+	.	ID=Dca62409.1.exon13;Parent=Dca62409.1