Carnation DB

Dca62415.1

Annotation

6-exons
f-1
sp|B9HH67_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_654478#GO:0016021;GO:0043085;GO:0016485#0F2P1C
AT2G31440.1 | Symbols: | INVOLVED IN: positive regulation of catalytic activity, protein processing; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aph-1 (InterPro:IPR009294); Has 268 Blast hits to 262 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). | chr2:13399309-13400971 REVERSE LENGTH=250
Repeat List (scaffold990)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62415.1	1	244	249	73.89	244	76	2e-105
Target_name	Start	End	Length	Cov(%)
sp\|B9HH67_POPTR	1	244	244	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62415.1	1	245	249	71.08	245	73	1e-103
Target_name	Start	End	Length	Cov(%)
AT2G31440.1	1	245	250	98

seqname	source	feature	start	end	score	strand	frame	group
scaffold990	Augus-PASA	mRNA	55284	58930	.	+	.	ID=Dca62415.1;Parent=Dca62415
scaffold990	Augus-PASA	exon	55284	55396	.	+	.	ID=Dca62415.1.exon1;Parent=Dca62415.1
scaffold990	Augus-PASA	exon	56711	56866	.	+	.	ID=Dca62415.1.exon2;Parent=Dca62415.1
scaffold990	Augus-PASA	exon	57421	57506	.	+	.	ID=Dca62415.1.exon3;Parent=Dca62415.1
scaffold990	Augus-PASA	exon	57809	57934	.	+	.	ID=Dca62415.1.exon4;Parent=Dca62415.1
scaffold990	Augus-PASA	exon	58175	58302	.	+	.	ID=Dca62415.1.exon5;Parent=Dca62415.1
scaffold990	Augus-PASA	exon	58790	58930	.	+	.	ID=Dca62415.1.exon6;Parent=Dca62415.1