Dca62439.1
Annotation
- 3-exons
- f-1
- sp|A5BMR0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041860#GO:0005622;GO:0003676;GO:0015074#1F1P1C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold991)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62439.1 |
3 |
60 |
321 |
11.83 |
58 |
66 |
2e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BMR0_VITVI |
733 |
790 |
1945 |
2.98 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62439.1 |
3 |
53 |
321 |
7.78 |
51 |
50 |
7e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
694 |
744 |
1428 |
3.57 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold991 |
Augustus |
mRNA |
17819 |
20200 |
. |
+ |
. |
ID=Dca62439.1;Parent=Dca62439 |
| scaffold991 |
Augustus |
exon |
17819 |
17832 |
. |
+ |
. |
ID=Dca62439.1.exon1;Parent=Dca62439.1 |
| scaffold991 |
Augustus |
exon |
17911 |
18062 |
. |
+ |
. |
ID=Dca62439.1.exon2;Parent=Dca62439.1 |
| scaffold991 |
Augustus |
exon |
19401 |
20200 |
. |
+ |
. |
ID=Dca62439.1.exon3;Parent=Dca62439.1 |
