Dca627.1
Annotation
- 3-exons
- f-1
- sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold1013)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca627.1 |
299 |
449 |
558 |
8.42 |
151 |
31 |
4e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH8_BETVU |
849 |
996 |
1365 |
10.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca627.1 |
54 |
287 |
558 |
13.97 |
234 |
33 |
1e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
304 |
540 |
857 |
27.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1013 |
Augustus |
mRNA |
34684 |
37528 |
. |
+ |
. |
ID=Dca627.1;Parent=Dca627 |
| scaffold1013 |
Augustus |
exon |
34684 |
35557 |
. |
+ |
. |
ID=Dca627.1.exon1;Parent=Dca627.1 |
| scaffold1013 |
Augustus |
exon |
36165 |
36648 |
. |
+ |
. |
ID=Dca627.1.exon2;Parent=Dca627.1 |
| scaffold1013 |
Augustus |
exon |
37210 |
37528 |
. |
+ |
. |
ID=Dca627.1.exon3;Parent=Dca627.1 |
