Carnation DB

Dca6360.1

Annotation

6-exons
f-1
sp|F6HU88_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g02820#unknown#0F0P0C
sp|B9RYW5_RICCO#Phosphatidylcholine transfer protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1314180#unknown#0F0P0C
Repeat List (scaffold12481)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6360.1	12	335	336	64.58	324	66	8e-125
Target_name	Start	End	Length	Cov(%)
sp\|F6HU88_VITVI	105	433	438	75.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6360.1	26	335	336	59.82	310	65	3e-119
Target_name	Start	End	Length	Cov(%)
AT1G64720.1	79	380	385	78.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12481	Augus-PASA	mRNA	3330	5843	.	+	.	ID=Dca6360.1;Parent=Dca6360
scaffold12481	Augus-PASA	exon	3330	3406	.	+	.	ID=Dca6360.1.exon1;Parent=Dca6360.1
scaffold12481	Augus-PASA	exon	4384	4546	.	+	.	ID=Dca6360.1.exon2;Parent=Dca6360.1
scaffold12481	Augus-PASA	exon	4658	4834	.	+	.	ID=Dca6360.1.exon3;Parent=Dca6360.1
scaffold12481	Augus-PASA	exon	4929	5012	.	+	.	ID=Dca6360.1.exon4;Parent=Dca6360.1
scaffold12481	Augus-PASA	exon	5180	5258	.	+	.	ID=Dca6360.1.exon5;Parent=Dca6360.1
scaffold12481	Augus-PASA	exon	5413	5843	.	+	.	ID=Dca6360.1.exon6;Parent=Dca6360.1