Carnation DB

Dca6387.1

Annotation

7-exons
f-1
sp|Q84LQ3_SOLLC#Putative FtsH protease#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#GO:0016020;GO:0005524;GO:0004222;GO:0017111;GO:0030163;GO:0006508#3F2P1C
Repeat List (scaffold125)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6387.1	1	699	699	79.11	699	78	0
Target_name	Start	End	Length	Cov(%)
sp\|Q84LQ3_SOLLC	7	714	714	99.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6387.1	39	670	699	71.38	632	78	0
Target_name	Start	End	Length	Cov(%)
Os01t0574500-01	47	684	716	89.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold125	Augustus	mRNA	54514	60619	.	-	.	ID=Dca6387.1;Parent=Dca6387
scaffold125	Augustus	exon	54514	55437	.	-	.	ID=Dca6387.1.exon1;Parent=Dca6387.1
scaffold125	Augustus	exon	56002	56478	.	-	.	ID=Dca6387.1.exon2;Parent=Dca6387.1
scaffold125	Augustus	exon	56601	56725	.	-	.	ID=Dca6387.1.exon3;Parent=Dca6387.1
scaffold125	Augustus	exon	56915	57160	.	-	.	ID=Dca6387.1.exon4;Parent=Dca6387.1
scaffold125	Augustus	exon	57608	57844	.	-	.	ID=Dca6387.1.exon5;Parent=Dca6387.1
scaffold125	Augustus	exon	58766	58847	.	-	.	ID=Dca6387.1.exon6;Parent=Dca6387.1
scaffold125	Augustus	exon	60611	60619	.	-	.	ID=Dca6387.1.exon7;Parent=Dca6387.1