Dca6397.1
Annotation
- 4-exons
- f-1
- sp|B9HDC5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_716781#GO:0005524;GO:0008026;GO:0003676#3F0P0C
- Os02t0146600-01 Similar to Eukaryotic initiation factor 4A (eIF4A) (eIF-4A).
- Repeat List (scaffold125)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6397.1 |
1 |
412 |
412 |
90.77 |
412 |
91 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HDC5_POPTR |
1 |
413 |
413 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6397.1 |
1 |
412 |
412 |
90.53 |
412 |
91 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0146600-01 |
1 |
414 |
415 |
99.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold125 |
Augustus |
mRNA |
171836 |
173495 |
. |
+ |
. |
ID=Dca6397.1;Parent=Dca6397 |
| scaffold125 |
Augustus |
exon |
171836 |
171900 |
. |
+ |
. |
ID=Dca6397.1.exon1;Parent=Dca6397.1 |
| scaffold125 |
Augustus |
exon |
171993 |
172099 |
. |
+ |
. |
ID=Dca6397.1.exon2;Parent=Dca6397.1 |
| scaffold125 |
Augustus |
exon |
172183 |
172613 |
. |
+ |
. |
ID=Dca6397.1.exon3;Parent=Dca6397.1 |
| scaffold125 |
Augustus |
exon |
172860 |
173495 |
. |
+ |
. |
ID=Dca6397.1.exon4;Parent=Dca6397.1 |
