Dca6408.1
Annotation
- 3-exons
- f-1
- sp|F8WL80_CITUN#Putative uncharacterized protein ORF13#Citrus unshiu (Satsuma mandarin) (Citrus nobilis var unshiu)#Name=ORF13#unknown#0F0P0C
- AT4G33100.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Mitochondrial distribution/morphology family 35/apoptosis (InterPro:IPR007918); Has 214 Blast hits to 214 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 69; Plants - 29; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr4:15971701-15972342 FORWARD LENGTH=92
- Repeat List (scaffold125)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6408.1 |
19 |
84 |
92 |
54.34 |
66 |
76 |
6e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F8WL80_CITUN |
12 |
77 |
100 |
66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6408.1 |
1 |
84 |
92 |
54.34 |
84 |
60 |
2e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G33100.1 |
1 |
76 |
92 |
82.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold125 |
Augustus |
mRNA |
275861 |
276896 |
. |
+ |
. |
ID=Dca6408.1;Parent=Dca6408 |
| scaffold125 |
Augustus |
exon |
275861 |
275979 |
. |
+ |
. |
ID=Dca6408.1.exon1;Parent=Dca6408.1 |
| scaffold125 |
Augustus |
exon |
276613 |
276697 |
. |
+ |
. |
ID=Dca6408.1.exon2;Parent=Dca6408.1 |
| scaffold125 |
Augustus |
exon |
276822 |
276896 |
. |
+ |
. |
ID=Dca6408.1.exon3;Parent=Dca6408.1 |
