Carnation DB

Dca6499.1

Annotation

6-exons
f-1
sp|B9GY58_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817661#unknown#0F0P0C
Repeat List (scaffold1254)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6499.1	5	410	411	82.48	406	83	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GY58_POPTR	14	423	424	96.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6499.1	32	410	411	74.2	379	81	0
Target_name	Start	End	Length	Cov(%)
Os07t0573400-02	54	429	431	87.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1254	Augus-PASA	mRNA	62402	65085	.	-	.	ID=Dca6499.1;Parent=Dca6499
scaffold1254	Augus-PASA	exon	62402	62779	.	-	.	ID=Dca6499.1.exon1;Parent=Dca6499.1
scaffold1254	Augus-PASA	exon	63600	63746	.	-	.	ID=Dca6499.1.exon2;Parent=Dca6499.1
scaffold1254	Augus-PASA	exon	63835	63888	.	-	.	ID=Dca6499.1.exon3;Parent=Dca6499.1
scaffold1254	Augus-PASA	exon	64188	64613	.	-	.	ID=Dca6499.1.exon4;Parent=Dca6499.1
scaffold1254	Augus-PASA	exon	64738	64824	.	-	.	ID=Dca6499.1.exon5;Parent=Dca6499.1
scaffold1254	Augus-PASA	exon	64942	65085	.	-	.	ID=Dca6499.1.exon6;Parent=Dca6499.1