Carnation DB

Dca6501.1

Annotation

5-exons
f-1
sp|E7BTN2_VITVI#Pectate lyase-like protein 1#Vitis vinifera (Grape)#unknown#GO:0016829#1F0P0C
Repeat List (scaffold1254)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6501.1	35	490	496	60.68	456	66	9e-179
Target_name	Start	End	Length	Cov(%)
sp\|E7BTN2_VITVI	26	483	496	92.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6501.1	9	453	496	57.86	445	65	1e-164
Target_name	Start	End	Length	Cov(%)
AT3G53190.1	1	443	483	91.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1254	Augustus	mRNA	73145	75005	.	-	.	ID=Dca6501.1;Parent=Dca6501
scaffold1254	Augustus	exon	73145	73361	.	-	.	ID=Dca6501.1.exon1;Parent=Dca6501.1
scaffold1254	Augustus	exon	73467	73672	.	-	.	ID=Dca6501.1.exon2;Parent=Dca6501.1
scaffold1254	Augustus	exon	73763	73954	.	-	.	ID=Dca6501.1.exon3;Parent=Dca6501.1
scaffold1254	Augustus	exon	74048	74759	.	-	.	ID=Dca6501.1.exon4;Parent=Dca6501.1
scaffold1254	Augus-PASA	exon	74842	75005	.	-	.	ID=Dca6501.1.exon5;Parent=Dca6501.1