Dca6610.1
Annotation
- 3-exons
- f-1
- sp|B9HF63_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1082429#GO:0008270#1F0P0C
- AT5G08750.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr5:2852912-2854343 FORWARD LENGTH=370
- Repeat List (scaffold126)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6610.1 |
1 |
353 |
353 |
65.72 |
353 |
63 |
1e-121
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HF63_POPTR |
1 |
367 |
367 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6610.1 |
1 |
343 |
353 |
63.17 |
343 |
63 |
6e-119
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G08750.3 |
8 |
359 |
370 |
95.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold126 |
Augustus |
mRNA |
211877 |
213429 |
. |
- |
. |
ID=Dca6610.1;Parent=Dca6610 |
| scaffold126 |
Augustus |
exon |
211877 |
211993 |
. |
- |
. |
ID=Dca6610.1.exon1;Parent=Dca6610.1 |
| scaffold126 |
Augustus |
exon |
212394 |
212468 |
. |
- |
. |
ID=Dca6610.1.exon2;Parent=Dca6610.1 |
| scaffold126 |
Augustus |
exon |
212560 |
213429 |
. |
- |
. |
ID=Dca6610.1.exon3;Parent=Dca6610.1 |
