Carnation DB

Dca6612.1

Annotation

13-exons
f-1
sp|D7SWH1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0031g02680#GO:0005524;GO:0004674#2F0P0C
sp|B9RYP0_RICCO#Cdk8, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1312220#GO:0005524;GO:0008353#2F0P0C
Repeat List (scaffold126)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6612.1	48	123	464	12.5	76	77	3e-26
Target_name	Start	End	Length	Cov(%)
sp\|D7SWH1_VITVI	23	97	481	15.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6612.1	48	123	464	11.42	76	70	1e-23
Target_name	Start	End	Length	Cov(%)
AT5G63610.1	18	90	470	15.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold126	Augus-PASA	mRNA	229000	235516	.	-	.	ID=Dca6612.1;Parent=Dca6612
scaffold126	Augus-PASA	exon	229000	229159	.	-	.	ID=Dca6612.1.exon1;Parent=Dca6612.1
scaffold126	Augus-PASA	exon	229953	230019	.	-	.	ID=Dca6612.1.exon2;Parent=Dca6612.1
scaffold126	Augustus	exon	230532	230724	.	-	.	ID=Dca6612.1.exon3;Parent=Dca6612.1
scaffold126	Augus-PASA	exon	231081	231189	.	-	.	ID=Dca6612.1.exon4;Parent=Dca6612.1
scaffold126	Augus-PASA	exon	231307	231339	.	-	.	ID=Dca6612.1.exon5;Parent=Dca6612.1
scaffold126	Augustus	exon	231751	231798	.	-	.	ID=Dca6612.1.exon6;Parent=Dca6612.1
scaffold126	Augus-PASA	exon	231901	231978	.	-	.	ID=Dca6612.1.exon7;Parent=Dca6612.1
scaffold126	Augustus	exon	232128	232212	.	-	.	ID=Dca6612.1.exon8;Parent=Dca6612.1
scaffold126	Augustus	exon	232283	232316	.	-	.	ID=Dca6612.1.exon9;Parent=Dca6612.1
scaffold126	Augustus	exon	232478	232572	.	-	.	ID=Dca6612.1.exon10;Parent=Dca6612.1
scaffold126	Augustus	exon	232732	232801	.	-	.	ID=Dca6612.1.exon11;Parent=Dca6612.1
scaffold126	Augustus	exon	233183	233281	.	-	.	ID=Dca6612.1.exon12;Parent=Dca6612.1
scaffold126	Augustus	exon	235193	235516	.	-	.	ID=Dca6612.1.exon13;Parent=Dca6612.1