Carnation DB

Dca663.1

Annotation

5-exons
f-1
sp|B9MY46_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827143#unknown#0F0P0C
Repeat List (scaffold1015)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca663.1	1	223	223	50.67	223	51	2e-57
Target_name	Start	End	Length	Cov(%)
sp\|B9MY46_POPTR	77	300	300	74.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca663.1	1	223	223	48.43	223	49	3e-53
Target_name	Start	End	Length	Cov(%)
AT3G59490.2	82	293	293	72.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1015	Augus-PASA	mRNA	12181	14523	.	-	.	ID=Dca663.1;Parent=Dca663
scaffold1015	Augus-PASA	exon	12181	12340	.	-	.	ID=Dca663.1.exon1;Parent=Dca663.1
scaffold1015	Augus-PASA	exon	13060	13104	.	-	.	ID=Dca663.1.exon2;Parent=Dca663.1
scaffold1015	Augus-PASA	exon	13586	13696	.	-	.	ID=Dca663.1.exon3;Parent=Dca663.1
scaffold1015	Augus-PASA	exon	14088	14323	.	-	.	ID=Dca663.1.exon4;Parent=Dca663.1
scaffold1015	Augustus	exon	14404	14523	.	-	.	ID=Dca663.1.exon5;Parent=Dca663.1