Carnation DB

Dca6716.1

Annotation

9-exons
f-1
sp|B9GYG5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830898#GO:0005509#1F0P0C
AT1G30900.1 | Symbols: VSR6, VSR3;3, BP80-3;3 | VACUOLAR SORTING RECEPTOR 6 | chr1:10997275-11000543 FORWARD LENGTH=631
Repeat List (scaffold12660)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6716.1	48	340	340	59.7	293	68	2e-123
Target_name	Start	End	Length	Cov(%)
sp\|B9GYG5_POPTR	332	630	630	47.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6716.1	49	325	340	60.58	277	74	9e-123
Target_name	Start	End	Length	Cov(%)
AT1G30900.1	331	612	631	44.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12660	Augustus	mRNA	4757	6668	.	-	.	ID=Dca6716.1;Parent=Dca6716
scaffold12660	Augustus	exon	4757	4870	.	-	.	ID=Dca6716.1.exon1;Parent=Dca6716.1
scaffold12660	Augustus	exon	4968	5071	.	-	.	ID=Dca6716.1.exon2;Parent=Dca6716.1
scaffold12660	Augustus	exon	5175	5303	.	-	.	ID=Dca6716.1.exon3;Parent=Dca6716.1
scaffold12660	Augustus	exon	5398	5461	.	-	.	ID=Dca6716.1.exon4;Parent=Dca6716.1
scaffold12660	Augustus	exon	5552	5634	.	-	.	ID=Dca6716.1.exon5;Parent=Dca6716.1
scaffold12660	Augustus	exon	5846	5927	.	-	.	ID=Dca6716.1.exon6;Parent=Dca6716.1
scaffold12660	Augustus	exon	6049	6194	.	-	.	ID=Dca6716.1.exon7;Parent=Dca6716.1
scaffold12660	Augustus	exon	6286	6355	.	-	.	ID=Dca6716.1.exon8;Parent=Dca6716.1
scaffold12660	Augustus	exon	6438	6668	.	-	.	ID=Dca6716.1.exon9;Parent=Dca6716.1