Carnation DB

Dca672.1

Annotation

5-exons
f-1
sp|B9SU09_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0454500#unknown#0F0P0C
AT1G06110.1 | Symbols: SKIP16 | SKP1/ASK-interacting protein 16 | chr1:1853237-1854938 REVERSE LENGTH=436
Repeat List (scaffold1015)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca672.1	4	428	428	63.31	425	61	3e-154
Target_name	Start	End	Length	Cov(%)
sp\|B9SU09_RICCO	3	446	446	99.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca672.1	4	428	428	56.77	425	56	2e-139
Target_name	Start	End	Length	Cov(%)
AT1G06110.1	3	436	436	99.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1015	Augustus	mRNA	86058	90253	.	-	.	ID=Dca672.1;Parent=Dca672
scaffold1015	Augustus	exon	86058	86136	.	-	.	ID=Dca672.1.exon1;Parent=Dca672.1
scaffold1015	Augustus	exon	86591	86697	.	-	.	ID=Dca672.1.exon2;Parent=Dca672.1
scaffold1015	Augustus	exon	87393	87605	.	-	.	ID=Dca672.1.exon3;Parent=Dca672.1
scaffold1015	Augus-PASA	exon	88296	88976	.	-	.	ID=Dca672.1.exon4;Parent=Dca672.1
scaffold1015	Augus-PASA	exon	90047	90253	.	-	.	ID=Dca672.1.exon5;Parent=Dca672.1