Carnation DB

Dca6746.1

Annotation

12-exons
f-1
sp|D7T9G4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g02190#unknown#0F0P0C
AT1G50120.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr1:18562302-18566015 FORWARD LENGTH=532
Repeat List (scaffold1268)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6746.1	41	541	542	60.88	501	64	0
Target_name	Start	End	Length	Cov(%)
sp\|D7T9G4_VITVI	34	551	552	93.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6746.1	6	541	542	56.08	536	55	3e-169
Target_name	Start	End	Length	Cov(%)
AT1G50120.1	2	531	532	99.62

seqname	source	feature	start	end	score	strand	frame	group
scaffold1268	Augustus	mRNA	25808	30707	.	+	.	ID=Dca6746.1;Parent=Dca6746
scaffold1268	Augustus	exon	25808	26156	.	+	.	ID=Dca6746.1.exon1;Parent=Dca6746.1
scaffold1268	Augustus	exon	27026	27103	.	+	.	ID=Dca6746.1.exon2;Parent=Dca6746.1
scaffold1268	Augustus	exon	27533	27690	.	+	.	ID=Dca6746.1.exon3;Parent=Dca6746.1
scaffold1268	Augustus	exon	27987	28062	.	+	.	ID=Dca6746.1.exon4;Parent=Dca6746.1
scaffold1268	Augustus	exon	28291	28358	.	+	.	ID=Dca6746.1.exon5;Parent=Dca6746.1
scaffold1268	Augustus	exon	28465	28672	.	+	.	ID=Dca6746.1.exon6;Parent=Dca6746.1
scaffold1268	Augustus	exon	28773	28904	.	+	.	ID=Dca6746.1.exon7;Parent=Dca6746.1
scaffold1268	Augustus	exon	29015	29121	.	+	.	ID=Dca6746.1.exon8;Parent=Dca6746.1
scaffold1268	Augustus	exon	29201	29254	.	+	.	ID=Dca6746.1.exon9;Parent=Dca6746.1
scaffold1268	Augustus	exon	29366	29449	.	+	.	ID=Dca6746.1.exon10;Parent=Dca6746.1
scaffold1268	Augustus	exon	29948	30111	.	+	.	ID=Dca6746.1.exon11;Parent=Dca6746.1
scaffold1268	Augustus	exon	30557	30707	.	+	.	ID=Dca6746.1.exon12;Parent=Dca6746.1