Dca6879.1
Annotation
- 4-exons
- f-1
- sp|B2BXI1_ARALL#Gag-pol polymerase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=GagPol2#unknown#0F0P0C
- Repeat List (scaffold12732)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6879.1 |
171 |
414 |
427 |
25.76 |
244 |
35 |
3e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXI1_ARALL |
349 |
663 |
672 |
46.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6879.1 |
266 |
410 |
427 |
11.47 |
145 |
33 |
5e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0439900-01 |
164 |
312 |
421 |
35.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12732 |
Augustus |
mRNA |
58 |
1555 |
. |
+ |
. |
ID=Dca6879.1;Parent=Dca6879 |
| scaffold12732 |
Augustus |
exon |
58 |
417 |
. |
+ |
. |
ID=Dca6879.1.exon1;Parent=Dca6879.1 |
| scaffold12732 |
Augustus |
exon |
473 |
672 |
. |
+ |
. |
ID=Dca6879.1.exon2;Parent=Dca6879.1 |
| scaffold12732 |
Augustus |
exon |
741 |
920 |
. |
+ |
. |
ID=Dca6879.1.exon3;Parent=Dca6879.1 |
| scaffold12732 |
Augustus |
exon |
1012 |
1555 |
. |
+ |
. |
ID=Dca6879.1.exon4;Parent=Dca6879.1 |
