Carnation DB

Dca6927.1

Annotation

6-exons
f-1
sp|Q3I6J2_SILLA#Putative uncharacterized protein#Silene latifolia (White campion) (Bladder campion)#unknown#unknown#0F0P0C
Repeat List (scaffold1276)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6927.1	334	603	892	10.42	270	34	7e-34
Target_name	Start	End	Length	Cov(%)
sp\|Q3I6J2_SILLA	102	336	555	42.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6927.1	407	511	892	3.69	105	31	1e-07
Target_name	Start	End	Length	Cov(%)
Os02t0307900-00	163	267	435	24.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1276	Augustus	mRNA	16441	20010	.	+	.	ID=Dca6927.1;Parent=Dca6927
scaffold1276	Augustus	exon	16441	16803	.	+	.	ID=Dca6927.1.exon1;Parent=Dca6927.1
scaffold1276	Augustus	exon	17236	17626	.	+	.	ID=Dca6927.1.exon2;Parent=Dca6927.1
scaffold1276	Augustus	exon	17745	17812	.	+	.	ID=Dca6927.1.exon3;Parent=Dca6927.1
scaffold1276	Augustus	exon	17934	18218	.	+	.	ID=Dca6927.1.exon4;Parent=Dca6927.1
scaffold1276	Augustus	exon	18332	19022	.	+	.	ID=Dca6927.1.exon5;Parent=Dca6927.1
scaffold1276	Augustus	exon	19130	20010	.	+	.	ID=Dca6927.1.exon6;Parent=Dca6927.1