Carnation DB

Dca6976.1

Annotation

11-exons
f-1
sp|B8B3E7_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_21850#GO:0003677;GO:0016818;GO:0016788;GO:0008270;GO:0006281#4F1P0C
AT1G48360.2 | Symbols: | zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides | chr1:17868661-17872946 FORWARD LENGTH=891
Repeat List (scaffold128)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6976.1	45	769	772	46.63	725	43	7e-170
Target_name	Start	End	Length	Cov(%)
sp\|B8B3E7_ORYSI	116	944	949	87.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6976.1	189	262	772	5.56	74	59	4e-16
Target_name	Start	End	Length	Cov(%)
AT1G48360.2	160	230	891	7.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold128	Augustus	mRNA	40427	48123	.	+	.	ID=Dca6976.1;Parent=Dca6976
scaffold128	Augustus	exon	40427	41107	.	+	.	ID=Dca6976.1.exon1;Parent=Dca6976.1
scaffold128	Augustus	exon	41196	41300	.	+	.	ID=Dca6976.1.exon2;Parent=Dca6976.1
scaffold128	Augustus	exon	42052	42114	.	+	.	ID=Dca6976.1.exon3;Parent=Dca6976.1
scaffold128	Augustus	exon	42973	43152	.	+	.	ID=Dca6976.1.exon4;Parent=Dca6976.1
scaffold128	Augustus	exon	44205	44275	.	+	.	ID=Dca6976.1.exon5;Parent=Dca6976.1
scaffold128	Augustus	exon	44360	44447	.	+	.	ID=Dca6976.1.exon6;Parent=Dca6976.1
scaffold128	Augustus	exon	44535	44652	.	+	.	ID=Dca6976.1.exon7;Parent=Dca6976.1
scaffold128	Augustus	exon	44930	44990	.	+	.	ID=Dca6976.1.exon8;Parent=Dca6976.1
scaffold128	Augustus	exon	46976	47249	.	+	.	ID=Dca6976.1.exon9;Parent=Dca6976.1
scaffold128	Augustus	exon	47360	47596	.	+	.	ID=Dca6976.1.exon10;Parent=Dca6976.1
scaffold128	Augustus	exon	47683	48123	.	+	.	ID=Dca6976.1.exon11;Parent=Dca6976.1