Carnation DB

Dca6987.1

Annotation

5-exons
f-1
sp|B9MX41_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1111330#GO:0004650;GO:0005975#1F1P0C
AT3G48950.1 | Symbols: | Pectin lyase-like superfamily protein | chr3:18148017-18149987 FORWARD LENGTH=469
Repeat List (scaffold128)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6987.1	16	462	470	68.51	447	72	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MX41_POPTR	1	449	452	99.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6987.1	30	461	470	64.46	432	70	0
Target_name	Start	End	Length	Cov(%)
AT3G48950.1	34	467	469	92.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold128	Augustus	mRNA	124991	130024	.	+	.	ID=Dca6987.1;Parent=Dca6987
scaffold128	Augustus	exon	124991	125008	.	+	.	ID=Dca6987.1.exon1;Parent=Dca6987.1
scaffold128	Augustus	exon	125211	125522	.	+	.	ID=Dca6987.1.exon2;Parent=Dca6987.1
scaffold128	Augustus	exon	128693	128813	.	+	.	ID=Dca6987.1.exon3;Parent=Dca6987.1
scaffold128	Augustus	exon	128948	129122	.	+	.	ID=Dca6987.1.exon4;Parent=Dca6987.1
scaffold128	Augustus	exon	129238	130024	.	+	.	ID=Dca6987.1.exon5;Parent=Dca6987.1