Carnation DB

Dca6994.1

Annotation

12-exons
f-1
sp|E0CUU1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0050g01290#unknown#0F0P0C
Os03t0125800-01 Cystathionine beta-synthase, core domain containing protein.
Repeat List (scaffold128)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6994.1	1	542	544	61.39	542	62	9e-178
Target_name	Start	End	Length	Cov(%)
sp\|E0CUU1_VITVI	1	538	540	99.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6994.1	8	535	544	56.06	528	57	4e-158
Target_name	Start	End	Length	Cov(%)
Os03t0125800-01	7	518	519	98.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold128	Augustus	mRNA	160484	163871	.	-	.	ID=Dca6994.1;Parent=Dca6994
scaffold128	Augustus	exon	160484	160796	.	-	.	ID=Dca6994.1.exon1;Parent=Dca6994.1
scaffold128	Augustus	exon	161155	161201	.	-	.	ID=Dca6994.1.exon2;Parent=Dca6994.1
scaffold128	Augustus	exon	161481	161728	.	-	.	ID=Dca6994.1.exon3;Parent=Dca6994.1
scaffold128	Augustus	exon	161815	161996	.	-	.	ID=Dca6994.1.exon4;Parent=Dca6994.1
scaffold128	Augustus	exon	162081	162154	.	-	.	ID=Dca6994.1.exon5;Parent=Dca6994.1
scaffold128	Augustus	exon	162290	162377	.	-	.	ID=Dca6994.1.exon6;Parent=Dca6994.1
scaffold128	Augustus	exon	162457	162596	.	-	.	ID=Dca6994.1.exon7;Parent=Dca6994.1
scaffold128	Augustus	exon	162676	162762	.	-	.	ID=Dca6994.1.exon8;Parent=Dca6994.1
scaffold128	Augustus	exon	163083	163196	.	-	.	ID=Dca6994.1.exon9;Parent=Dca6994.1
scaffold128	Augustus	exon	163351	163434	.	-	.	ID=Dca6994.1.exon10;Parent=Dca6994.1
scaffold128	Augustus	exon	163521	163597	.	-	.	ID=Dca6994.1.exon11;Parent=Dca6994.1
scaffold128	Augustus	exon	163691	163871	.	-	.	ID=Dca6994.1.exon12;Parent=Dca6994.1