Carnation DB

Dca7001.1

Annotation

5-exons
f-1
sp|E0CUQ2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0050g01860#GO:0016021;GO:0055085#0F1P1C
AT5G24030.1 | Symbols: SLAH3 | SLAC1 homologue 3 | chr5:8118618-8120993 REVERSE LENGTH=635
Repeat List (scaffold128)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7001.1	1	575	575	66.6	575	62	0
Target_name	Start	End	Length	Cov(%)
sp\|E0CUQ2_VITVI	1	617	627	98.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7001.1	16	574	575	60.34	559	57	0
Target_name	Start	End	Length	Cov(%)
AT5G24030.1	12	625	635	96.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold128	Augustus	mRNA	235503	238011	.	+	.	ID=Dca7001.1;Parent=Dca7001
scaffold128	Augustus	exon	235503	235631	.	+	.	ID=Dca7001.1.exon1;Parent=Dca7001.1
scaffold128	Augustus	exon	236131	236577	.	+	.	ID=Dca7001.1.exon2;Parent=Dca7001.1
scaffold128	Augus-PASA	exon	236670	237440	.	+	.	ID=Dca7001.1.exon3;Parent=Dca7001.1
scaffold128	Augus-PASA	exon	237542	237573	.	+	.	ID=Dca7001.1.exon4;Parent=Dca7001.1
scaffold128	Augus-PASA	exon	237663	238011	.	+	.	ID=Dca7001.1.exon5;Parent=Dca7001.1