Carnation DB

Dca7014.1

Annotation

11-exons
f-1
sp|B9I791_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1097738#GO:0005622;GO:0005524;GO:0043140;GO:0003676;GO:0006310;GO:0006281;GO:0006260#3F3P1C
Os07t0681600-01 DNA helicase, ATP-dependent, RecQ type domain containing protein.
Repeat List (scaffold1280)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7014.1	3	525	525	56.38	523	57	3e-169
Target_name	Start	End	Length	Cov(%)
sp\|B9I791_POPTR	336	854	854	60.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7014.1	3	525	525	45.14	523	45	1e-124
Target_name	Start	End	Length	Cov(%)
Os07t0681600-01	370	886	887	58.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1280	Augustus	mRNA	17320	22465	.	+	.	ID=Dca7014.1;Parent=Dca7014
scaffold1280	Augustus	exon	17320	17389	.	+	.	ID=Dca7014.1.exon1;Parent=Dca7014.1
scaffold1280	Augustus	exon	17717	17853	.	+	.	ID=Dca7014.1.exon2;Parent=Dca7014.1
scaffold1280	Augustus	exon	18653	18761	.	+	.	ID=Dca7014.1.exon3;Parent=Dca7014.1
scaffold1280	Augustus	exon	19240	19282	.	+	.	ID=Dca7014.1.exon4;Parent=Dca7014.1
scaffold1280	Augustus	exon	19379	19547	.	+	.	ID=Dca7014.1.exon5;Parent=Dca7014.1
scaffold1280	Augustus	exon	20058	20128	.	+	.	ID=Dca7014.1.exon6;Parent=Dca7014.1
scaffold1280	Augustus	exon	20303	20396	.	+	.	ID=Dca7014.1.exon7;Parent=Dca7014.1
scaffold1280	Augustus	exon	20547	20759	.	+	.	ID=Dca7014.1.exon8;Parent=Dca7014.1
scaffold1280	Augustus	exon	21596	21805	.	+	.	ID=Dca7014.1.exon9;Parent=Dca7014.1
scaffold1280	Augustus	exon	21919	22254	.	+	.	ID=Dca7014.1.exon10;Parent=Dca7014.1
scaffold1280	Augustus	exon	22340	22465	.	+	.	ID=Dca7014.1.exon11;Parent=Dca7014.1