Carnation DB

Dca7191.1

Annotation

11-exons
f-1
sp|B9N5G7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_745139#unknown#0F0P0C
sp|B9RRU1_RICCO#Pollen specific protein sf21, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0798100#unknown#0F0P0C
Repeat List (scaffold129)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7191.1	1	345	346	73.98	345	74	8e-151
Target_name	Start	End	Length	Cov(%)
sp\|B9N5G7_POPTR	1	346	347	99.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7191.1	1	343	346	68.78	343	69	4e-140
Target_name	Start	End	Length	Cov(%)
AT5G56750.1	1	344	346	99.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold129	Augus-PASA	mRNA	111585	115087	.	-	.	ID=Dca7191.1;Parent=Dca7191
scaffold129	Augus-PASA	exon	111585	111818	.	-	.	ID=Dca7191.1.exon1;Parent=Dca7191.1
scaffold129	Augus-PASA	exon	111912	112047	.	-	.	ID=Dca7191.1.exon2;Parent=Dca7191.1
scaffold129	Augus-PASA	exon	112243	112298	.	-	.	ID=Dca7191.1.exon3;Parent=Dca7191.1
scaffold129	Augus-PASA	exon	112408	112449	.	-	.	ID=Dca7191.1.exon4;Parent=Dca7191.1
scaffold129	Augus-PASA	exon	112531	112608	.	-	.	ID=Dca7191.1.exon5;Parent=Dca7191.1
scaffold129	Augus-PASA	exon	112687	112773	.	-	.	ID=Dca7191.1.exon6;Parent=Dca7191.1
scaffold129	Augus-PASA	exon	112885	112945	.	-	.	ID=Dca7191.1.exon7;Parent=Dca7191.1
scaffold129	Augus-PASA	exon	113048	113136	.	-	.	ID=Dca7191.1.exon8;Parent=Dca7191.1
scaffold129	Augus-PASA	exon	113534	113631	.	-	.	ID=Dca7191.1.exon9;Parent=Dca7191.1
scaffold129	Augus-PASA	exon	113932	114031	.	-	.	ID=Dca7191.1.exon10;Parent=Dca7191.1
scaffold129	Augus-PASA	exon	115028	115087	.	-	.	ID=Dca7191.1.exon11;Parent=Dca7191.1