Carnation DB

Dca7443.1

Annotation

15-exons
f-1
sp|D7LRG8_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_485153#GO:0005622;GO:0004221;GO:0008270;GO:0006511#2F1P1C
AT3G47890.1 | Symbols: | Ubiquitin carboxyl-terminal hydrolase-related protein | chr3:17667172-17673530 REVERSE LENGTH=1568
Repeat List (scaffold130)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7443.1	33	1540	1543	50.22	1508	49	0
Target_name	Start	End	Length	Cov(%)
sp\|D7LRG8_ARALL	8	1568	1571	99.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7443.1	1	1540	1543	51.19	1540	47	0
Target_name	Start	End	Length	Cov(%)
AT3G47910.2	1	1605	1607	99.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold130	Augustus	mRNA	67598	77486	.	-	.	ID=Dca7443.1;Parent=Dca7443
scaffold130	Augustus	exon	67598	67684	.	-	.	ID=Dca7443.1.exon1;Parent=Dca7443.1
scaffold130	Augustus	exon	67765	67851	.	-	.	ID=Dca7443.1.exon2;Parent=Dca7443.1
scaffold130	Augustus	exon	68397	68530	.	-	.	ID=Dca7443.1.exon3;Parent=Dca7443.1
scaffold130	Augustus	exon	68675	68822	.	-	.	ID=Dca7443.1.exon4;Parent=Dca7443.1
scaffold130	Augustus	exon	69192	69467	.	-	.	ID=Dca7443.1.exon5;Parent=Dca7443.1
scaffold130	Augustus	exon	69785	69997	.	-	.	ID=Dca7443.1.exon6;Parent=Dca7443.1
scaffold130	Augustus	exon	70101	70291	.	-	.	ID=Dca7443.1.exon7;Parent=Dca7443.1
scaffold130	Augustus	exon	71083	71283	.	-	.	ID=Dca7443.1.exon8;Parent=Dca7443.1
scaffold130	Augustus	exon	72270	72396	.	-	.	ID=Dca7443.1.exon9;Parent=Dca7443.1
scaffold130	Augustus	exon	73130	73415	.	-	.	ID=Dca7443.1.exon10;Parent=Dca7443.1
scaffold130	Augustus	exon	73536	73576	.	-	.	ID=Dca7443.1.exon11;Parent=Dca7443.1
scaffold130	Augustus	exon	73675	73836	.	-	.	ID=Dca7443.1.exon12;Parent=Dca7443.1
scaffold130	Augustus	exon	73935	74063	.	-	.	ID=Dca7443.1.exon13;Parent=Dca7443.1
scaffold130	Augustus	exon	74190	75737	.	-	.	ID=Dca7443.1.exon14;Parent=Dca7443.1
scaffold130	Augustus	exon	76485	77486	.	-	.	ID=Dca7443.1.exon15;Parent=Dca7443.1