Carnation DB

Dca7492.1

Annotation

7-exons
f-1
sp|B9MUV3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_589921#GO:0042802;GO:0004252;GO:0043086;GO:0006508#2F2P0C
sp|P93221_SOLLC#Proteinase TMP#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#GO:0005618;GO:0016020;GO:0042802;GO:0004252;GO:0043086;GO:0006508#2F2P2C
Repeat List (scaffold1301)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7492.1	122	369	388	46.64	248	73	6e-97
Target_name	Start	End	Length	Cov(%)
sp\|B9MUV3_POPTR	266	514	827	30.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7492.1	122	366	388	32.47	245	52	1e-61
Target_name	Start	End	Length	Cov(%)
Os04t0543700-01	255	499	816	30.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1301	Augustus	mRNA	18839	21951	.	+	.	ID=Dca7492.1;Parent=Dca7492
scaffold1301	Augustus	exon	18839	18876	.	+	.	ID=Dca7492.1.exon1;Parent=Dca7492.1
scaffold1301	Augustus	exon	18946	19075	.	+	.	ID=Dca7492.1.exon2;Parent=Dca7492.1
scaffold1301	Augustus	exon	20060	20161	.	+	.	ID=Dca7492.1.exon3;Parent=Dca7492.1
scaffold1301	Augustus	exon	20765	20904	.	+	.	ID=Dca7492.1.exon4;Parent=Dca7492.1
scaffold1301	Augustus	exon	20989	21058	.	+	.	ID=Dca7492.1.exon5;Parent=Dca7492.1
scaffold1301	Augustus	exon	21165	21447	.	+	.	ID=Dca7492.1.exon6;Parent=Dca7492.1
scaffold1301	Augustus	exon	21548	21951	.	+	.	ID=Dca7492.1.exon7;Parent=Dca7492.1