Carnation DB

Dca7551.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os03t0643433-00 Similar to J013022N21, full insert sequence.
Repeat List (scaffold1305)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7551.1	2	199	213	40.84	198	39	2e-40
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	674	900	1114	20.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7551.1	63	205	213	26.76	143	31	7e-15
Target_name	Start	End	Length	Cov(%)
AT3G24255.1	3	186	746	24.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1305	Augustus	mRNA	16071	18883	.	+	.	ID=Dca7551.1;Parent=Dca7551
scaffold1305	Augustus	exon	16071	16462	.	+	.	ID=Dca7551.1.exon1;Parent=Dca7551.1
scaffold1305	Augustus	exon	16550	16798	.	+	.	ID=Dca7551.1.exon2;Parent=Dca7551.1
scaffold1305	Augustus	exon	17747	18011	.	+	.	ID=Dca7551.1.exon3;Parent=Dca7551.1
scaffold1305	Augustus	exon	18375	18669	.	+	.	ID=Dca7551.1.exon4;Parent=Dca7551.1
scaffold1305	Augustus	exon	18738	18883	.	+	.	ID=Dca7551.1.exon5;Parent=Dca7551.1