Carnation DB

Dca7733.1

Annotation

8-exons
f-1
sp|F6HCK4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0149g00140#GO:0016491#1F0P0C
sp|D7LAA7_ARALL#FAD-dependent oxidoreductase family protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_480239#GO:0016491#1F0P0C
Repeat List (scaffold1314)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7733.1	13	238	261	46.74	226	47	3e-52
Target_name	Start	End	Length	Cov(%)
sp\|F6HCK4_VITVI	33	295	450	58.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7733.1	26	238	261	41.37	213	44	2e-46
Target_name	Start	End	Length	Cov(%)
AT2G22650.1	23	266	420	58.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1314	Augus-PASA	mRNA	1247	4551	.	+	.	ID=Dca7733.1;Parent=Dca7733
scaffold1314	Augus-PASA	exon	1247	1323	.	+	.	ID=Dca7733.1.exon1;Parent=Dca7733.1
scaffold1314	Augustus	exon	1396	1528	.	+	.	ID=Dca7733.1.exon2;Parent=Dca7733.1
scaffold1314	Augustus	exon	1671	1750	.	+	.	ID=Dca7733.1.exon3;Parent=Dca7733.1
scaffold1314	Augus-PASA	exon	1905	1956	.	+	.	ID=Dca7733.1.exon4;Parent=Dca7733.1
scaffold1314	Augus-PASA	exon	2045	2191	.	+	.	ID=Dca7733.1.exon5;Parent=Dca7733.1
scaffold1314	Augus-PASA	exon	2278	2383	.	+	.	ID=Dca7733.1.exon6;Parent=Dca7733.1
scaffold1314	Augus-PASA	exon	2459	2585	.	+	.	ID=Dca7733.1.exon7;Parent=Dca7733.1
scaffold1314	Augus-PASA	exon	4488	4551	.	+	.	ID=Dca7733.1.exon8;Parent=Dca7733.1