Carnation DB

Dca7836.1

Annotation

6-exons
f-1
sp|F6HTR1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0030g02200#GO:0005634;GO:0046983;GO:0043565;GO:0003700#3F0P1C
sp|Q93YM7_TOBAC#BZIP transcription factor#Nicotiana tabacum (Common tobacco)#Name=BZI-1#GO:0005634;GO:0046983;GO:0043565;GO:0003700#3F0P1C
Repeat List (scaffold1320)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7836.1	1	360	369	58.8	360	57	2e-90
Target_name	Start	End	Length	Cov(%)
sp\|F6HTR1_VITVI	1	376	423	88.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7836.1	1	300	369	39.56	300	49	1e-51
Target_name	Start	End	Length	Cov(%)
AT5G28770.2	1	248	314	78.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1320	Augus-PASA	mRNA	33869	38131	.	+	.	ID=Dca7836.1;Parent=Dca7836
scaffold1320	Augus-PASA	exon	33869	34210	.	+	.	ID=Dca7836.1.exon1;Parent=Dca7836.1
scaffold1320	Augus-PASA	exon	35631	35727	.	+	.	ID=Dca7836.1.exon2;Parent=Dca7836.1
scaffold1320	Augus-PASA	exon	36272	36458	.	+	.	ID=Dca7836.1.exon3;Parent=Dca7836.1
scaffold1320	Augus-PASA	exon	37250	37325	.	+	.	ID=Dca7836.1.exon4;Parent=Dca7836.1
scaffold1320	Augus-PASA	exon	37411	37536	.	+	.	ID=Dca7836.1.exon5;Parent=Dca7836.1
scaffold1320	Augus-PASA	exon	37850	38131	.	+	.	ID=Dca7836.1.exon6;Parent=Dca7836.1