Carnation DB

Dca7994.1

Annotation

5-exons
f-1
sp|B9I2N2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1095267#unknown#0F0P0C
Os08t0416900-01 Similar to dnaJ domain containing protein.
Repeat List (scaffold133)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7994.1	12	254	254	66.53	243	68	1e-94
Target_name	Start	End	Length	Cov(%)
sp\|B9I2N2_POPTR	18	266	266	93.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7994.1	42	254	254	60.62	213	73	1e-89
Target_name	Start	End	Length	Cov(%)
AT5G23040.1	47	258	258	82.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold133	Augus-PASA	mRNA	74843	77528	.	+	.	ID=Dca7994.1;Parent=Dca7994
scaffold133	Augus-PASA	exon	74843	74901	.	+	.	ID=Dca7994.1.exon1;Parent=Dca7994.1
scaffold133	Augus-PASA	exon	74999	75093	.	+	.	ID=Dca7994.1.exon2;Parent=Dca7994.1
scaffold133	Augus-PASA	exon	75998	76380	.	+	.	ID=Dca7994.1.exon3;Parent=Dca7994.1
scaffold133	Augus-PASA	exon	77216	77292	.	+	.	ID=Dca7994.1.exon4;Parent=Dca7994.1
scaffold133	Augus-PASA	exon	77378	77528	.	+	.	ID=Dca7994.1.exon5;Parent=Dca7994.1