Carnation DB

Dca8003.1

Annotation

5-exons
f-1
sp|D7SIS1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g04550#GO:0047800#1F0P0C
Repeat List (scaffold133)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8003.1	17	265	265	66.79	249	71	5e-103
Target_name	Start	End	Length	Cov(%)
sp\|D7SIS1_VITVI	1	251	251	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8003.1	19	265	265	57.35	247	60	2e-84
Target_name	Start	End	Length	Cov(%)
AT1G18490.1	30	282	282	89.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold133	Augus-PASA	mRNA	210763	214716	.	+	.	ID=Dca8003.1;Parent=Dca8003
scaffold133	Augus-PASA	exon	210763	210928	.	+	.	ID=Dca8003.1.exon1;Parent=Dca8003.1
scaffold133	Augus-PASA	exon	212965	213116	.	+	.	ID=Dca8003.1.exon2;Parent=Dca8003.1
scaffold133	Augus-PASA	exon	213882	214044	.	+	.	ID=Dca8003.1.exon3;Parent=Dca8003.1
scaffold133	Augus-PASA	exon	214289	214489	.	+	.	ID=Dca8003.1.exon4;Parent=Dca8003.1
scaffold133	Augus-PASA	exon	214601	214716	.	+	.	ID=Dca8003.1.exon5;Parent=Dca8003.1