Carnation DB

Dca8008.1

Annotation

5-exons
f-1
sp|B9I2V2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_772851#unknown#0F0P0C
Repeat List (scaffold133)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8008.1	24	98	128	27.34	75	47	3e-14
Target_name	Start	End	Length	Cov(%)
sp\|B9I2V2_POPTR	42	116	119	63.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8008.1	30	83	128	22.65	54	54	7e-11
Target_name	Start	End	Length	Cov(%)
Os09t0473966-00	39	91	151	35.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold133	Augustus	mRNA	249755	251273	.	+	.	ID=Dca8008.1;Parent=Dca8008
scaffold133	Augustus	exon	249755	249816	.	+	.	ID=Dca8008.1.exon1;Parent=Dca8008.1
scaffold133	Augustus	exon	250402	250502	.	+	.	ID=Dca8008.1.exon2;Parent=Dca8008.1
scaffold133	Augustus	exon	250734	250788	.	+	.	ID=Dca8008.1.exon3;Parent=Dca8008.1
scaffold133	Augustus	exon	251035	251153	.	+	.	ID=Dca8008.1.exon4;Parent=Dca8008.1
scaffold133	Augustus	exon	251224	251273	.	+	.	ID=Dca8008.1.exon5;Parent=Dca8008.1