Carnation DB

Dca8040.1

Annotation

5-exons
f-1
sp|G5DW80_SILLA#Oxysterol-binding protein#Silene latifolia (White campion) (Bladder campion)#unknown#unknown#0F0P0C
Repeat List (scaffold13312)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8040.1	1	54	255	19.6	54	93	4e-23
Target_name	Start	End	Length	Cov(%)
sp\|G5DW80_SILLA	1	54	455	11.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8040.1	12	54	255	10.98	43	66	4e-10
Target_name	Start	End	Length	Cov(%)
AT5G02100.1	11	53	453	9.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13312	Augustus	mRNA	363	4513	.	-	.	ID=Dca8040.1;Parent=Dca8040
scaffold13312	Augustus	exon	363	609	.	-	.	ID=Dca8040.1.exon1;Parent=Dca8040.1
scaffold13312	Augustus	exon	797	975	.	-	.	ID=Dca8040.1.exon2;Parent=Dca8040.1
scaffold13312	Augustus	exon	1385	1563	.	-	.	ID=Dca8040.1.exon3;Parent=Dca8040.1
scaffold13312	Augustus	exon	3315	3376	.	-	.	ID=Dca8040.1.exon4;Parent=Dca8040.1
scaffold13312	Augustus	exon	4413	4513	.	-	.	ID=Dca8040.1.exon5;Parent=Dca8040.1