Carnation DB

Dca8054.1

Annotation

7-exons
f-1
sp|A5ASA6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_020335#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold1332)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8054.1	169	686	780	37.17	518	53	8e-169
Target_name	Start	End	Length	Cov(%)
sp\|A5ASA6_VITVI	1002	1552	1839	29.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8054.1	217	476	780	13.84	260	35	1e-48
Target_name	Start	End	Length	Cov(%)
Os08t0202300-03	70	379	591	52.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1332	Augustus	mRNA	50766	62006	.	+	.	ID=Dca8054.1;Parent=Dca8054
scaffold1332	Augustus	exon	50766	51335	.	+	.	ID=Dca8054.1.exon1;Parent=Dca8054.1
scaffold1332	Augustus	exon	51614	51994	.	+	.	ID=Dca8054.1.exon2;Parent=Dca8054.1
scaffold1332	Augustus	exon	52157	52627	.	+	.	ID=Dca8054.1.exon3;Parent=Dca8054.1
scaffold1332	Augustus	exon	52849	52945	.	+	.	ID=Dca8054.1.exon4;Parent=Dca8054.1
scaffold1332	Augustus	exon	54034	54554	.	+	.	ID=Dca8054.1.exon5;Parent=Dca8054.1
scaffold1332	Augustus	exon	61405	61557	.	+	.	ID=Dca8054.1.exon6;Parent=Dca8054.1
scaffold1332	Augustus	exon	61857	62006	.	+	.	ID=Dca8054.1.exon7;Parent=Dca8054.1