Dca8167.1
Annotation
- 3-exons
- f-1
- sp|B9I5T6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_571156#GO:0016831;GO:0030170;GO:0006520#2F1P0C
- Os10t0400500-00 Similar to Pyridoxal-dependent decarboxylase conserved domain containing protein, expressed.
- Repeat List (scaffold134)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8167.1 |
6 |
490 |
491 |
58.85 |
485 |
60 |
7e-179
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I5T6_POPTR |
12 |
493 |
493 |
97.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8167.1 |
6 |
484 |
491 |
52.34 |
479 |
53 |
7e-153
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os10t0400500-00 |
12 |
501 |
503 |
97.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold134 |
Augustus |
mRNA |
70214 |
73362 |
. |
+ |
. |
ID=Dca8167.1;Parent=Dca8167 |
| scaffold134 |
Augustus |
exon |
70214 |
70658 |
. |
+ |
. |
ID=Dca8167.1.exon1;Parent=Dca8167.1 |
| scaffold134 |
Augustus |
exon |
71793 |
72173 |
. |
+ |
. |
ID=Dca8167.1.exon2;Parent=Dca8167.1 |
| scaffold134 |
Augus-PASA |
exon |
72713 |
73362 |
. |
+ |
. |
ID=Dca8167.1.exon3;Parent=Dca8167.1 |
