Carnation DB

Dca8249.1

Annotation

5-exons
f-1
sp|F6H7G3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0116g01000#unknown#0F0P0C
Os05t0150000-01 Proline synthetase co-transcribed bacterial homolog protein.
Repeat List (scaffold1344)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8249.1	63	204	239	47.69	142	81	6e-62
Target_name	Start	End	Length	Cov(%)
sp\|F6H7G3_VITVI	19	159	264	53.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8249.1	78	209	239	44.76	132	80	4e-57
Target_name	Start	End	Length	Cov(%)
Os05t0150000-01	14	147	244	54.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1344	Augustus	mRNA	28348	30043	.	+	.	ID=Dca8249.1;Parent=Dca8249
scaffold1344	Augustus	exon	28348	28761	.	+	.	ID=Dca8249.1.exon1;Parent=Dca8249.1
scaffold1344	Augustus	exon	28994	29060	.	+	.	ID=Dca8249.1.exon2;Parent=Dca8249.1
scaffold1344	Augustus	exon	29226	29272	.	+	.	ID=Dca8249.1.exon3;Parent=Dca8249.1
scaffold1344	Augustus	exon	29682	29767	.	+	.	ID=Dca8249.1.exon4;Parent=Dca8249.1
scaffold1344	Augustus	exon	29938	30043	.	+	.	ID=Dca8249.1.exon5;Parent=Dca8249.1