Carnation DB

Dca8286.1

Annotation

6-exons
f-1
sp|B9N163_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_923571#unknown#0F0P0C
Os01t0100500-01 Immunoglobulin-like domain containing protein.
Repeat List (scaffold1346)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8286.1	1	391	397	54.65	391	53	1e-112
Target_name	Start	End	Length	Cov(%)
sp\|B9N163_POPTR	204	612	614	66.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8286.1	1	392	397	48.36	392	47	8e-102
Target_name	Start	End	Length	Cov(%)
AT5G16520.1	194	601	608	67.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1346	Augustus	mRNA	58464	60405	.	+	.	ID=Dca8286.1;Parent=Dca8286
scaffold1346	Augustus	exon	58464	59043	.	+	.	ID=Dca8286.1.exon1;Parent=Dca8286.1
scaffold1346	Augustus	exon	59190	59260	.	+	.	ID=Dca8286.1.exon2;Parent=Dca8286.1
scaffold1346	Augustus	exon	59470	59559	.	+	.	ID=Dca8286.1.exon3;Parent=Dca8286.1
scaffold1346	Augustus	exon	59677	59865	.	+	.	ID=Dca8286.1.exon4;Parent=Dca8286.1
scaffold1346	Augustus	exon	59979	60075	.	+	.	ID=Dca8286.1.exon5;Parent=Dca8286.1
scaffold1346	Augustus	exon	60239	60405	.	+	.	ID=Dca8286.1.exon6;Parent=Dca8286.1